MEMOTE for standardized genome-scale metabolic model testing.

C Lieven; ME Beber; BG Olivier; FT Bergmann; M Ataman; P Babaei; JA Bartell; LM Blank; S Chauhan; K Correia; Christian Diener; A Dräger; BE Ebert; JN Edirisinghe; JP Faria; AM Feist; G Fengos; RMT Fleming; B García-Jiménez; V Hatzimanikatis; W van Helvoirt; CS Henry; H Hermjakob; MJ Herrgård; A Kaafarani; HU Kim; Z King; S Klamt; E Klipp; JJ Koehorst; M König; M Lakshmanan; DY Lee; SY Lee; S Lee; NE Lewis; F Liu; H Ma; D Machado; R Mahadevan; P Maia; A Mardinoglu; GL Medlock; JM Monk; J Nielsen; LK Nielsen; J Nogales; I Nookaew; BO Palsson; JA Papin; KR Patil; M Poolman; ND Price; O Resendis-Antonio; A Richelle; I Rocha; BJ Sánchez; PJ Schaap; RS Malik Sheriff; S Shoaie; N Sonnenschein; B Teusink; P Vilaça; JO Vik; JAH Wodke; JC Xavier; Q Yuan; M Zakhartsev; C Zhang

doi:10.1038/s41587-020-0446-y

MEMOTE for standardized genome-scale metabolic model testing.

C Lieven
, ME Beber
, BG Olivier
, FT Bergmann
, M Ataman
, P Babaei
, JA Bartell
, LM Blank
, S Chauhan
, K Correia
, Christian Diener
, A Dräger
, BE Ebert
, JN Edirisinghe
, JP Faria
, AM Feist
, G Fengos
, RMT Fleming
, B García-Jiménez
, V Hatzimanikatis

W van Helvoirt, CS Henry, H Hermjakob, MJ Herrgård, A Kaafarani, HU Kim, Z King, S Klamt, E Klipp, JJ Koehorst, M König, M Lakshmanan, DY Lee, SY Lee, S Lee, NE Lewis, F Liu, H Ma, D Machado, R Mahadevan, P Maia, A Mardinoglu, GL Medlock, JM Monk, J Nielsen, LK Nielsen, J Nogales, I Nookaew, BO Palsson, JA Papin, KR Patil, M Poolman, ND Price, O Resendis-Antonio, A Richelle, I Rocha, BJ Sánchez, PJ Schaap, RS Malik Sheriff, S Shoaie, N Sonnenschein, B Teusink, P Vilaça, JO Vik, JAH Wodke, JC Xavier, Q Yuan, M Zakhartsev, C Zhang

Research output: Contribution to journal › Research letter

363 Citations (Web of Science)

Original language	English
Journal	Nature Biotechnology
DOIs	https://doi.org/10.1038/s41587-020-0446-y
Publication status	Published - 2020

Branches of science

102 Computer Sciences
106 Biology

DOI

10.1038/s41587-020-0446-y

Links

Cite this

Lieven, C., Beber, ME., Olivier, BG., Bergmann, FT., Ataman, M., Babaei, P., Bartell, JA., Blank, LM., Chauhan, S., Correia, K., Diener, C., Dräger, A., Ebert, BE., Edirisinghe, JN., Faria, JP., Feist, AM., Fengos, G., Fleming, RMT., García-Jiménez, B., ... Zhang, C. (2020). MEMOTE for standardized genome-scale metabolic model testing. Nature Biotechnology. https://doi.org/10.1038/s41587-020-0446-y

@article{5d480b119026437286ca9bc352e8cda6,

title = "MEMOTE for standardized genome-scale metabolic model testing.",

author = "C Lieven and ME Beber and BG Olivier and FT Bergmann and M Ataman and P Babaei and JA Bartell and LM Blank and S Chauhan and K Correia and Christian Diener and A Dr{\"a}ger and BE Ebert and JN Edirisinghe and JP Faria and AM Feist and G Fengos and RMT Fleming and B Garc{\'i}a-Jim{\'e}nez and V Hatzimanikatis and \{van Helvoirt\}, W and CS Henry and H Hermjakob and MJ Herrg{\aa}rd and A Kaafarani and HU Kim and Z King and S Klamt and E Klipp and JJ Koehorst and M K{\"o}nig and M Lakshmanan and DY Lee and SY Lee and S Lee and NE Lewis and F Liu and H Ma and D Machado and R Mahadevan and P Maia and A Mardinoglu and GL Medlock and JM Monk and J Nielsen and LK Nielsen and J Nogales and I Nookaew and BO Palsson and JA Papin and KR Patil and M Poolman and ND Price and O Resendis-Antonio and A Richelle and I Rocha and BJ S{\'a}nchez and PJ Schaap and \{Malik Sheriff\}, RS and S Shoaie and N Sonnenschein and B Teusink and P Vila{\c c}a and JO Vik and JAH Wodke and JC Xavier and Q Yuan and M Zakhartsev and C Zhang",

year = "2020",

doi = "10.1038/s41587-020-0446-y",

language = "English",

journal = "Nature Biotechnology",

issn = "1087-0156",

publisher = "Nature Research",

}

Lieven, C, Beber, ME, Olivier, BG, Bergmann, FT, Ataman, M, Babaei, P, Bartell, JA, Blank, LM, Chauhan, S, Correia, K, Diener, C, Dräger, A, Ebert, BE, Edirisinghe, JN, Faria, JP, Feist, AM, Fengos, G, Fleming, RMT, García-Jiménez, B, Hatzimanikatis, V, van Helvoirt, W, Henry, CS, Hermjakob, H, Herrgård, MJ, Kaafarani, A, Kim, HU, King, Z, Klamt, S, Klipp, E, Koehorst, JJ, König, M, Lakshmanan, M, Lee, DY, Lee, SY, Lee, S, Lewis, NE, Liu, F, Ma, H, Machado, D, Mahadevan, R, Maia, P, Mardinoglu, A, Medlock, GL, Monk, JM, Nielsen, J, Nielsen, LK, Nogales, J, Nookaew, I, Palsson, BO, Papin, JA, Patil, KR, Poolman, M, Price, ND, Resendis-Antonio, O, Richelle, A, Rocha, I, Sánchez, BJ, Schaap, PJ, Malik Sheriff, RS, Shoaie, S, Sonnenschein, N, Teusink, B, Vilaça, P, Vik, JO, Wodke, JAH, Xavier, JC, Yuan, Q, Zakhartsev, M & Zhang, C 2020, 'MEMOTE for standardized genome-scale metabolic model testing.', Nature Biotechnology. https://doi.org/10.1038/s41587-020-0446-y

TY - JOUR

T1 - MEMOTE for standardized genome-scale metabolic model testing.

AU - Lieven, C

AU - Beber, ME

AU - Olivier, BG

AU - Bergmann, FT

AU - Ataman, M

AU - Babaei, P

AU - Bartell, JA

AU - Blank, LM

AU - Chauhan, S

AU - Correia, K

AU - Diener, Christian

AU - Dräger, A

AU - Ebert, BE

AU - Edirisinghe, JN

AU - Faria, JP

AU - Feist, AM

AU - Fengos, G

AU - Fleming, RMT

AU - García-Jiménez, B

AU - Hatzimanikatis, V

AU - van Helvoirt, W

AU - Henry, CS

AU - Hermjakob, H

AU - Herrgård, MJ

AU - Kaafarani, A

AU - Kim, HU

AU - King, Z

AU - Klamt, S

AU - Klipp, E

AU - Koehorst, JJ

AU - König, M

AU - Lakshmanan, M

AU - Lee, DY

AU - Lee, SY

AU - Lee, S

AU - Lewis, NE

AU - Liu, F

AU - Ma, H

AU - Machado, D

AU - Mahadevan, R

AU - Maia, P

AU - Mardinoglu, A

AU - Medlock, GL

AU - Monk, JM

AU - Nielsen, J

AU - Nielsen, LK

AU - Nogales, J

AU - Nookaew, I

AU - Palsson, BO

AU - Papin, JA

AU - Patil, KR

AU - Poolman, M

AU - Price, ND

AU - Resendis-Antonio, O

AU - Richelle, A

AU - Rocha, I

AU - Sánchez, BJ

AU - Schaap, PJ

AU - Malik Sheriff, RS

AU - Shoaie, S

AU - Sonnenschein, N

AU - Teusink, B

AU - Vilaça, P

AU - Vik, JO

AU - Wodke, JAH

AU - Xavier, JC

AU - Yuan, Q

AU - Zakhartsev, M

AU - Zhang, C

PY - 2020

Y1 - 2020

UR - https://www.webofscience.com/wos/woscc/full-record/WOS:000517739700001

UR - https://pubmed.ncbi.nlm.nih.gov/32123384

UR - https://pmc.ncbi.nlm.nih.gov/articles/PMC7082222

U2 - 10.1038/s41587-020-0446-y

DO - 10.1038/s41587-020-0446-y

M3 - Research letter

C2 - 32123384

SN - 1087-0156

JO - Nature Biotechnology

JF - Nature Biotechnology

ER -